• protein_coding" "AGT25156","N559_3508","Klebsiella pneumoniae","putative short-chain dehydrogenase/reductase SDR [Ensembl]. (ntu.edu.sg)
  • Following condensation, Cpr33 acts as 3-oxoacyl-ACP reductase that catalyzes reduction to the β-hydroxythioester intermediate. (uky.edu)
  • In this scenario, hydride is predicted to be added to the re face to generate the S configuration resulting in the same stereochemical outcome as other 3-oxoacyl-ACP reductase (FabG) from bacterial type II fatty acid synthases.These findings are critical advancement for interrogating the biosynthesis of the unusual chemical components of the family of antibiotics of capuramycin. (uky.edu)
  • A novel 3-oxoacyl-ACP reductase (FabG3) is involved in the xanthomonadin biosynthesis of Xanthomonas campestris pv. (brenda-enzymes.org)
  • Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (genebiosystems.com)
  • The systematic name of this enzyme class is acetyl-CoA:malonyl-[acyl-carrier-protein] C-acyltransferase. (wikipedia.org)
  • Although there is substantial structural homology among all bacterial FabH enzymes determined thus far, with two channels for binding of acyl-CoA and malonyl-ACP substrates and a conserved catalytic triad (C122, H258, N289 in mtFabH), mtFabH contains residues along the acyl-CoA binding channel that preferentially select for longer-chain substrates peaking with lauroyl-CoA (C12). (wikipedia.org)
  • Cpr37, which belongs to the adenylation domain protein in the nonribosomal peptide synthase (NRPS), subsequently activates PABA and loads it to holo-Cpr36 Two proteins Cpr34 and Cpr35 work in concert to catalyze decarboxylative condensation between a thioester linked PABA and malonyl- S -acyl carrier protein (ACP) during aromatic polyketide biosynthesis catalyzed by type II polyketide synthases. (uky.edu)
  • Beta-ketoacyl-ACP synthase I of Escherichia coli: nucleotide sequence of the fabB gene and identification of the cerulenin binding residue. (genebiosystems.com)
  • The codon table used was the FreqB table from " Design Parameters to Control Synthetic Gene Expression in Escherichia coli ", which was used because it was shown to express proteins well and was recommended to us by JCVI. (freegenes.org)
  • In M. tuberculosis, the beta-ketoacyl-[acyl-carrier-protein] synthase III enzyme is designated mtFabH and is a crucial link between the fatty acid synthase-I and fatty acid synthase-II pathways producing mycolic acids. (wikipedia.org)
  • In the case of a metabolic reaction network, gene or even protein expression data may not best capture the interactions between the network's components, as mRNA levels or enzyme concentrations do not necessarily correlate with reaction rate or metabolite turnover. (biomedcentral.com)
  • There are many possible applications for these genes: you could try to recreate essential gene pathways in-vitro, or purify the proteins for functional studies, or create a synthetic MoClo-compatible Bacillus subtilis genome using these genes and the sgRNAs available from the Bacillus Genetic Stock Center. (freegenes.org)
  • Beyond the P protein, the Henipavirus P gene also encodes the V and W proteins which share with P their N-terminal, intrinsically disordered domain (NTD) and possess a unique C-terminal domain. (sciencegate.app)
  • Here we show that Glycine max JASMONATE-ZIM DOMAIN 3 (GmJAZ3), a gene identified through gene co-expression network analysis, regulates seed-related traits in soybean. (bvsalud.org)
  • GmJAZ3 interacted with both G. max RESPONSE REGULATOR 18a (GmRR18a) and GmMYC2a to inhibit their transcriptional activation of cytokinin oxidase gene G. max CYTOKININ OXIDASE 3-4 (GmCKX3-4), which usually affects seed traits. (bvsalud.org)
  • select ( V1 , V2 , V11 , Protein.names , Gene.Ontology. (github.io)
  • V1" "V2" "V11" "Protein.names" "Gene.Ontology. (github.io)
  • Functional characterization of Cpr38, which has sequence similarity to the gene products encoded by pabA and pabB from E. coli , revealed that it functions as a 4-amino-4-deoxychorismate (ADC) synthase catalyzing a two-step reaction involving amidohydrolysis of L-Gln with ammonia channeled and incorporated into chorismic acid to generate ADC. (uky.edu)
  • Cpr12, encoded by a gene that was originally proposed to be outside the gene cluster and sharing similarity to proteins annotated as ADC lyase, was revealed to catalyze the elimination of pyruvate to form PABA. (uky.edu)
  • Recently, Tang and coworkers used gene expression data to construct time-course protein interaction networks, and found that functional modules detected in the time-course networks more closely matched known regulatory complexes than those detected in the static networks[ 11 ]. (biomedcentral.com)
  • The C16 acyl-CoA product acts as a substrate for the synthesis of meromycolic acid by FAS-II, whereas the C26 fatty acid constitutes the alpha branch of the final mycolic acid. (wikipedia.org)
  • ABC transporter ATP-binding protein-unknown substrate. (ntu.edu.sg)
  • protein_coding" "AGT24100","N559_2404","Klebsiella pneumoniae","putative ABC transporter substrate binding protein [Ensembl]. (ntu.edu.sg)
  • Here we present the functional assignment and biochemical characterization of seven proteins, Cpr33-38 and Cpr12, that initiate the biosynthesis of the polyamide. (uky.edu)
  • It catalyzes the transfer of long-chain fatty acids, preferentially unsaturated fatty acids, to lysophosphatides with the formation of 1,2-diacylglycero-3-phosphocholine and CoA. (wakehealth.edu)
  • Here, through analysis of an ethylene-response mutant mhz9, we identified a glycine-tyrosine-phenylalanine (GYF) domain protein MHZ9, which positively regulates ethylene signaling at translational level in rice. (bvsalud.org)
  • In agreement with published findings regarding different HEA and LEA B. napus cultivars, comparison of FAE1 protein sequences from HEA and LEA Brassicaceae revealed one crucial amino acid difference: the serine residue at position 282 of the HEA FAE1 sequences is substituted by phenylalanine in LEA B. napus cv. (unboundmedicine.com)
  • protein_coding" "AGT24181","N559_2495","Klebsiella pneumoniae","cytochrome C biogenesis protein transmembrane region [Ensembl]. (ntu.edu.sg)
  • Protein of unknown function DUF3119 [Interproscan]. (ntu.edu.sg)
  • TIM barrel domain, Glyoxalase/fosfomycin resistance/dioxygenase domain, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [InterProScan]. (ntu.edu.sg)
  • β-Ketoacyl-acyl-carrier-protein synthase III is involved in the dissociated (or type II) fatty-acid biosynthesis system that occurs in plants and bacteria. (wikipedia.org)
  • ABC-type transport system, ATP-binding protein [Ensembl]. (ntu.edu.sg)
  • Henipavirus W proteins antagonize interferon (IFN) signaling through NTD-mediated binding to STAT1 and STAT4, and prevent type I IFN expression and production of chemokines. (sciencegate.app)
  • protein_coding" "AGT23894","N559_2182","Klebsiella pneumoniae","putative ABC-type taurine transport system periplasmic binding component [Ensembl]. (ntu.edu.sg)
  • ABC transporter ATP-binding protein & cell division. (ntu.edu.sg)
  • After 3 days, severe diarrhea, stomach best matches for the sequences derived from Campy- ache, and shivering developed in the only 3 persons (the lobacter jejuni , but no sequences of the recovery DNA patient plus 2 family members) who had eaten undercooked sample showed any such signifi cant matches. (cdc.gov)
  • Cell division ATP-binding protein FtsE [Ensembl]. (ntu.edu.sg)
  • The present study provides an additional example, among the few reported so far, of a viral protein forming amyloid-like fibrils, therefore significantly contributing to enlarge our currently limited knowledge of viral amyloids. (sciencegate.app)
  • In some cancer cell lines, this protein has been found to be fused with estrogen receptor-alpha (ER-alpha), in which the N-terminus of FAS is fused in-frame with the C-terminus of ER-alpha. (thermofisher.com)
  • Taurine import ATP-binding protein TauB [Ensembl]. (ntu.edu.sg)
  • In light of the critical role of the Henipavirus W proteins in evading the host innate immune response and of the functional role of phase separation in biology, these studies provide a conceptual asset to further investigate the functional impact of the phase separation abilities of the W proteins. (sciencegate.app)
  • Biological activity of ABD-GCSF protein was assessed by proliferation assay on NFS-60 cells. (sciencegate.app)
  • hypothetical protein SAOV_0248 [Staphylococcus aureus subsp. (polygenicpathways.co.uk)
  • 4628 hypothetical protein BBZA01000001 CDS ARMA_0005 5077. (go.jp)
  • 5685 hypothetical protein BBZA01000001 CDS ARMA_0006 5873. (go.jp)
  • 7021 hypothetical protein BBZA01000001 CDS ARMA_0007 complement(7097. (go.jp)
  • 7504) hypothetical protein BBZA01000001 CDS ARMA_0008 complement(7590. (go.jp)
  • 11958) hypothetical protein BBZA01000001 CDS ARMA_0012 12170. (go.jp)
  • 578 hypothetical protein BBZA01000002 CDS ARMA_0016 684. (go.jp)
  • 2342 hypothetical protein BBZA01000002 CDS ARMA_0017 2339. (go.jp)
  • 3094 hypothetical protein BBZA01000002 CDS ARMA_0018 3478. (go.jp)
  • 4371 hypothetical protein BBZA01000002 CDS ARMA_0019 complement(4468. (go.jp)
  • 5751) hypothetical protein BBZA01000002 CDS ARMA_0021 complement(5880. (go.jp)
  • 6020) hypothetical protein BBZA01000002 CDS ARMA_0020 6069. (go.jp)
  • 7490 hypothetical protein BBZA01000002 CDS ARMA_0022 complement(7569. (go.jp)
  • 10130) hypothetical protein BBZA01000002 CDS ARMA_0023 10363. (go.jp)
  • 12985 hypothetical protein BBZA01000002 CDS ARMA_0025 13067. (go.jp)
  • 13828 hypothetical protein BBZA01000002 CDS ARMA_0026 13840. (go.jp)
  • 15584 hypothetical protein BBZA01000003 CDS ARMA_0028 complement(2147. (go.jp)
  • 2662) hypothetical protein BBZA01000003 CDS ARMA_0030 complement(2909. (go.jp)
  • 3070) hypothetical protein BBZA01000003 CDS ARMA_0029 3089. (go.jp)
  • 3247 hypothetical protein BBZA01000003 CDS ARMA_0031 3817. (go.jp)
  • 11054 hypothetical protein BBZA01000003 CDS ARMA_0036 11082. (go.jp)
  • 11983 hypothetical protein BBZA01000003 CDS ARMA_0038 complement(11960. (go.jp)
  • 12616) hypothetical protein BBZA01000003 CDS ARMA_0039 12726. (go.jp)
  • 13859 hypothetical protein BBZA01000003 CDS ARMA_0040 13859. (go.jp)
  • 14554 hypothetical protein BBZA01000003 CDS ARMA_0041 14582. (go.jp)
  • 15289 hypothetical protein BBZA01000003 CDS ARMA_0042 15306. (go.jp)
  • 15746 hypothetical protein BBZA01000003 CDS ARMA_0043 complement(15750. (go.jp)
  • 16253) hypothetical protein BBZA01000003 CDS ARMA_0044 complement(16376. (go.jp)
  • 16723) hypothetical protein BBZA01000003 tRNA ARMA_tRNA01 complement(16745. (go.jp)
  • 17762 hypothetical protein BBZA01000003 CDS ARMA_0046 17875. (go.jp)
  • 19373 hypothetical protein BBZA01000003 CDS ARMA_0048 complement(19431. (go.jp)
  • 20651) hypothetical protein BBZA01000003 CDS ARMA_0049 20873. (go.jp)
  • 21793 hypothetical protein BBZA01000003 CDS ARMA_0050 21812. (go.jp)
  • 24549 hypothetical protein BBZA01000003 CDS ARMA_0052 24709. (go.jp)
  • 25812 hypothetical protein BBZA01000003 CDS ARMA_0053 25854. (go.jp)
  • 27638 hypothetical protein BBZA01000003 CDS ARMA_0054 27690. (go.jp)
  • 29561 hypothetical protein BBZA01000003 CDS ARMA_0055 29551. (go.jp)
  • 30963 hypothetical protein BBZA01000003 CDS ARMA_0056 30956. (go.jp)
  • 32158 hypothetical protein BBZA01000003 CDS ARMA_0057 32158. (go.jp)
  • 35130 hypothetical protein BBZA01000003 CDS ARMA_0058 35127. (go.jp)
  • 35501 hypothetical protein BBZA01000003 CDS ARMA_0059 35523. (go.jp)
  • 38051 hypothetical protein BBZA01000003 CDS ARMA_0060 38048. (go.jp)
  • 38443 hypothetical protein BBZA01000003 CDS ARMA_0061 38445. (go.jp)
  • 40466 hypothetical protein BBZA01000003 CDS ARMA_0063 complement(40556. (go.jp)
  • 42784) hypothetical protein BBZA01000004 CDS ARMA_0066 23. (go.jp)
  • 493 hypothetical protein BBZA01000004 CDS ARMA_0067 664. (go.jp)
  • 5181 tryptophan synthase beta chain trpB BBZA01000003 CDS ARMA_0032 5369. (go.jp)
  • Mitochondrial substrate/solute carrier [Interproscan]. (ntu.edu.sg)
  • 10614) putative ABC transport system permease protein BBZA01000001 CDS ARMA_0010 complement(10625. (go.jp)
  • 11353) putative ABC transport system ATP-binding protein BBZA01000001 CDS ARMA_0011 complement(11350. (go.jp)
  • creates a toxic condition, which directly alters the stability of various lipids, proteins, enzymes of critical metabolic pathways, replication, transcription, and translation machinery, which makes it difficult for the micro organisms to survive [ 70 , 73 ]. (sciendo.com)
  • 23209 ribosomal protein S12 methylthiotransferase rimO BBZA01000003 CDS ARMA_0051 23344. (go.jp)
  • Proteobacteria primarily utilize acyl-homoserine lactones (AHLs) as quorum-sensing signals for intra-/interspecies communication to control pathogen infections. (bvsalud.org)
  • synthesis within the cell during the catalytic conversion of L-arginine to L-citrulline by nitric oxide synthases (NOSs) is carried out [ 79 ]. (sciendo.com)
  • One representative compound, II-15, significantly inhibited the secretion of the Pst DC3000 AvrPto effector protein. (bvsalud.org)
  • We found that the soil antifungal bacterium Lysobacter enzymogenes OH11 (OH11) could use T4ASS to deliver the effector protein Le1288 into the cytoplasm of another soil microbiome bacterium Pseudomonas fluorescens 2P24 (2P24). (bvsalud.org)
  • The C16 acyl-CoA product acts as a substrate for the synthesis of meromycolic acid by FAS-II, whereas the C26 fatty acid constitutes the alpha branch of the final mycolic acid. (wikipedia.org)
  • Sodium:dicarboxylate symporter family protein [Ensembl]. (ntu.edu.sg)
  • 1833 recombination protein RecA recA BBZA01000004 CDS ARMA_0068 complement(1901. (go.jp)
  • Bioinformatics analysis of homologies between pathogen antigens, autoantigens and the CFTR cystic fibrosis protein: A role for immunoadsorption therapy? (polygenicpathways.co.uk)
  • It is a pyridoxyal phosphate protein and the reaction occurs in mitochondria as the first step of the heme biosynthetic pathway. (wakehealth.edu)
  • 3 Division of Infectious Disease, Department of Medicine and the Ruy V. Lourenco Center for the Study of Emerging and Re-emerging Pathogens, Rutgers University - New Jersey Medical School, Newark, NJ, USA. (nih.gov)
  • Gram-negative pathogens including P. syringae commonly use the type III secretion system (T3SS) as a transport channel to deliver effector proteins into host cells, disrupting host defences and facilitating virulence, providing a novel target for antibacterial drug development. (bvsalud.org)
  • 601 1-acyl-sn-glycerol-3-phosphate acyltransferase plsC BBZA01000001 CDS ARMA_0002 604. (go.jp)
  • Enzima que interviene en la síntesis de ácidos grasos de cadena larga, que adiciona una unidad de dos carbonos de malonil-(proteína transportadora de acilo) a otra molécula de acilo graso-(proteína transportadora de acilo), formando una beta-cetoacil-(proteína transportadora de acilo) con liberación de anhídrido carbónico. (bvsalud.org)
  • It results in the conversion of phytanic acid into pristanic acid (removal of a 3-methyl group), which then undergoes beta-oxidation in peroxisomes. (medscape.com)
  • 11834 heme exporter protein C ccmC BBZA01000003 CDS ARMA_0037 11831. (go.jp)